together with brief user bio and description of her/his academic activity.

[Link to my homepage](https://sites.google.com/view/danisch/home)
## I will read the following papers.
- [Quasi-Succinct Indices](https://papers-gamma.link/paper/130)
- [PageRank as a Function of the Damping Factor](https://papers-gamma.link/paper/106)
- [Graph Stream Algorithms: A Survey](https://papers-gamma.link/paper/102)
- [Network Sampling: From Static to Streaming Graphs](https://papers-gamma.link/paper/122)
- [The Protein-Folding Problem, 50 Years On](https://papers-gamma.link/paper/78)
- [Computational inference of gene regulatory networks: Approaches, limitations and opportunitie](https://papers-gamma.link/paper/77)
- [Graph complexity analysis identifies an ETV5 tumor-specific network in human and murine low-grade glioma](https://papers-gamma.link/paper/79)
- [Gene Networks in Plant Biology: Approaches in Reconstruction and Analysis](https://papers-gamma.link/paper/76)
- [The non-convex Burer–Monteiro approach works on smooth semidefinite programs](https://papers-gamma.link/paper/80)
- [Solving SDPs for synchronization and MaxCut problems via the Grothendieck inequality](https://papers-gamma.link/paper/81)
- [Influence maximization in complex networks through optimal percolation](https://papers-gamma.link/paper/70)
- [Motifs in Temporal Networks](https://papers-gamma.link/paper/61)
- [Deep Sparse Rectifier Neural Networks](https://papers-gamma.link/paper/69)
- [Sparse Convolutional Neural Networks](https://papers-gamma.link/paper/67)
- [A fast and simple algorithm for training neural probabilistic language models](https://papers-gamma.link/paper/58)
- [Adding One Neuron Can Eliminate All Bad Local Minima](https://papers-gamma.link/paper/71)
## I read the following papers.
### 2019-2020
- [Fast and High Quality Multilevel Scheme for Partitioning Irregular Graphs](https://papers-gamma.link/paper/162)
- [Karp-Sipser based kernels for bipartite graph matching](https://papers-gamma.link/paper/160)
- [Speedup Graph Processing by Graph Ordering](https://papers-gamma.link/paper/159)
- [Tree Sampling Divergence: An Information-Theoretic Metric for Hierarchical Graph Clustering](https://papers-gamma.link/paper/154)
### 2018-2019:
- [SWeG: Lossless and Lossy Summarization of Web-Scale Graphs](https://papers-gamma.link/paper/139)
- [Smoothed Analysis: An Attempt to Explain the Behavior of Algorithms in Practice](https://papers-gamma.link/paper/129)
- [Are stable instances easy?](https://papers-gamma.link/paper/128)
- [Hierarchical Taxonomy Aware Network Embedding](https://papers-gamma.link/paper/116)
- [Billion-scale Network Embedding with Iterative Random Projection](https://papers-gamma.link/paper/110)
- [HARP: Hierarchical Representation Learning for Networks](https://papers-gamma.link/paper/109/)
- [Layered Label Propagation: A MultiResolution Coordinate-Free Ordering for Compressing Social Networks](https://papers-gamma.link/paper/105)
### 2017-2018:
- [Link Prediction in Graph Streams](https://papers-gamma.link/paper/101)
- [The Community-search Problem and How to Plan a Successful Cocktail Party](https://papers-gamma.link/paper/74)
- [A Nonlinear Programming Algorithm for Solving Semidefinite Programs via Low-rank Factorization](https://papers-gamma.link/paper/55)
- [Deep Learning](https://papers-gamma.link/paper/68)
- [Reducing the Dimensionality of Data with Neural Networks](https://papers-gamma.link/paper/65)
- [Representation Learning on Graphs: Methods and Applications](https://papers-gamma.link/paper/60)
- [Improved Approximation Algorithms for MAX k-CUT and MAX BISECTION](https://papers-gamma.link/paper/56)
- [Cauchy Graph Embedding](https://papers-gamma.link/paper/53)
- [Phase Transitions in Semidefinite Relaxations](https://papers-gamma.link/paper/57)
- [Graph Embedding Techniques, Applications, and Performance: A Survey](https://papers-gamma.link/paper/52)
- [VERSE: Versatile Graph Embeddings from Similarity Measures](https://papers-gamma.link/paper/48)
- [Hierarchical Clustering Beyond the Worst-Case](https://papers-gamma.link/paper/45)
- [Scalable Motif-aware Graph Clustering](https://papers-gamma.link/paper/18)
- [Practical Algorithms for Linear Boolean-width](https://papers-gamma.link/paper/40)
- [New Perspectives and Methods in Link Prediction](https://papers-gamma.link/paper/28/New%20Perspectives%20and%20Methods%20in%20Link%20Prediction)
- [In-Core Computation of Geometric Centralities with HyperBall: A Hundred Billion Nodes and Beyond](https://papers-gamma.link/paper/37)
- [Diversity is All You Need: Learning Skills without a Reward Function](https://papers-gamma.link/paper/36)
- [When Hashes Met Wedges: A Distributed Algorithm for Finding High Similarity Vectors](https://papers-gamma.link/paper/23)
- [Fast Approximation of Centrality](https://papers-gamma.link/paper/35/Fast%20Approximation%20of%20Centrality)
- [Indexing Public-Private Graphs](https://papers-gamma.link/paper/19/Indexing%20Public-Private%20Graphs)
- [On the uniform generation of random graphs with prescribed degree sequences](https://papers-gamma.link/paper/26/On%20the%20uniform%20generation%20of%20random%20graphs%20with%20prescribed%20d%20egree%20sequences)
- [Linear Additive Markov Processes](https://papers-gamma.link/paper/21/Linear%20Additive%20Markov%20Processes)
- [ESCAPE: Efficiently Counting All 5-Vertex Subgraphs](https://papers-gamma.link/paper/17/ESCAPE:%20Efficiently%20Counting%20All%205-Vertex%20Subgraphs)
- [The k-peak Decomposition: Mapping the Global Structure of Graphs](https://papers-gamma.link/paper/16/The%20k-peak%20Decomposition:%20Mapping%20the%20Global%20Structure%20of%20Graphs)
- [A Fast and Provable Method for Estimating Clique Counts Using Turán’s Theorem](https://papers-gamma.link/paper/24)

☆

1

An improvement to Boldi-Vigna WebGraph. It uses Huffman coding, asymmetric numeral systems (a form of arithmetic coding) and a new hybrid integer encoding schema.
The paper also mentions other algorithms like [Log(Graph) by Besta et al.](https://www.youtube.com/watch?v=j98N9nthr0M) and Apostolico-Drovandi method together with $k^2$-trees, 2D block trees, ZipG graph store... Author suggest the [Besta-Hoefler survey (2018) with more than 460 references](https://arxiv.org/abs/1806.01799) to any reader interested in lossless graph compression methods.
The paper does not consider node permutations.
The code is in [google's github account](https://github.com/google/zuckerli).

☆

2

Hello, are you aware of any open source implementation of this algorithm ?

Some nice presentations on the topic:
- https://www.irif.fr/~habib/Documents/cours_4-2015.pdf
- http://igm.univ-mlv.fr/AlgoB/algoperm2012/04Paul.pdf
- http://www.lirmm.fr/~paul/Talks/talk-06-algo-sem-McGill.pdf

>See table 3 from https://arxiv.org/abs/1811.10705
This is with $n=50$ nodes. It seems that the behavior is not the same for $n$ large:
- I think that in a large ER, if the proba of connection $p$ is not too large or too small, then it is rare to find a group of nodes with the same neighbors outside the group (i.e. find a module). Can you prove that?
- I don't think that the code https://github.com/antonovvk/decmod is buggy.

[Almost all finite graphs are asymmetric](https://en.wikipedia.org/wiki/Asymmetric_graph#Random_graphs). There is no pair of vertices with common neighborhood.

## Comments: